Program - The Swedish Bioinformatics Workshop 25-26 October 2018

  Thursday, October 25
09.00 - 10.00   



10:00 - 12.00

GSMM Tutorial

Adil Mardinoglu
"Generation of human cell/tissue specific GEMs"

Partho Sen
"Hands-on-lab:Genome-Scale metabolomic modeling"

12:00 - 13.30

 L u n c h

12:30 - 13:30

 MedBioInfo internal meeting

13:30 - 15.00

Chair: Stephen Rush

Georg Fuellen
"Bioinformatics of Ageing"

Fredrik Boulund
"Analyzing human microbiomes at the Center for Translational Microbiome Research"

15.00 - 15.30

C o f f e e

(Setting up poster latest)

15:30 - 16.30

Chair: Dirk Repsilber

Jon Robinson
"Integrative systems biology through genome-scale metabolic models"

Dieter Maier
"Knowledge Management at the Proms - surviving the tooth and claw world of commercial bioinformatics, and having fun"

16:30 - 18.00 Poster session I
19:30 D i n n er  (Örebro Castle)


Friday, October 26

08:00 - 10.00

Chair: Aidan McGlinchey

Anne-Laure Boulesteix
"A plea against fishing for significance and for open science with focus on omics data analysis"

Stephen Rush
"Capturing context-specific regulation in molecular interaction networks"

Mika Gustafson
"Deep auto-encoders for the identification of disease modules"

10:00 - 10:30 C o f f e e
10:30 - 11:30

Chair: Mårten Lindqvist

Cecilia Engel Thomas 
"Multiomics signatures predictive of early diabetes remission following bariatric surgery: A Direct study"

Ola Spjuth
"Towards intelligent drug discovery safety testing

 11:30 - 12:00 Poster session II and refreshments
 12:00 - 13:00

Chair: Sukithar Rajan

Arne Elofsson
"Using deep learning and direct coupling analysis for protein structure prediction"

Pär Engström
"NBIS --the national bioinformatics infrastructure Sweden"                                                    

13:00 - 14.00 L u n c h
14:00 - 15:00

Career Panel Discussion organised by RSG-Sweden

Join us for a panel discussion on essential skills and networking advice for students and early-career researchers.