This page in English

Partho Sarathi Sen

Tjänstetitel: Affilierad forskare Organisation: Institutionen för medicinska vetenskaper


Telefon: 019 303000 (växel)

Rum: -


Om Partho Sarathi Sen

Sen is an expert in bioinformatics and computational systems biology. He obtained PhD in Biological Sciences from University of Montpellier2, France. He develops and applies best practices in computational biology by deploying mathematical modeling and machine learning techniques on x-omics (transcriptomics, metabolomics, metagenomics, etc.) datasets to study autoimmune and metabolic disease / disorders such as T1D, Celiac disease, Obesity and NAFLD in humans. He pursued his postdoctorate from Prof. Nielsen's lab at Chalmers University of Technology, Gothenburg, Sweden. There, he was involved in several international and EU projects under the topics metabolomics / lipidomics and human metabolism.

Currently, he is also working as a senior postdoctoral researcher in the Systems Medicine group at Turku Bioscience, University of Turku, Finland, headed by Prof. Matej Oresic. He is involved in various cutting-edge projects that includes, modeling of immune cells and human gut microbiota in T1D and in NAFLD.



Artiklar i tidskrifter |  Artiklar, forskningsöversikter | 

Artiklar i tidskrifter

Sen, P. , Lamichhane, S. , Mathema, V. B. , McGlinchey, A. J. , Dickens, A. M. , Khoomrung, S. & Oresic, M. (2021). Deep learning meets metabolomics: a methodological perspective. Briefings in Bioinformatics, 22 (2), 1531-1542.
Sen, P. , Qadri, S. , Luukkonen, P. K. , Ragnarsdottir, O. , McGlinchey, A. J. , Jäntti, S. , Juuti, A. , Arola, J. & et al. (2021). Exposure to environmental contaminants is associated with altered hepatic lipid metabolism in non-alcoholic fatty liver disease. Journal of Hepatology.
Sen, P. , Govaere, O. , Sinioja, T. , McGlinchey, A. J. , Geng, D. , Ratziu, V. , Bugianesi, E. , Schattenberg, J. & et al. (2021). Genome-scale metabolic modeling of human hepatocytes reveals dysregulation of glycosphingolipid pathways in progressive non-alcoholic fatty liver disease. Journal of Hepatology, 75 (Suppl. 2), S256-S256.
Lamichhane, S. , Sen, P. , Alves, M. A. , Ribeiro, H. C. , Raunioniemi, P. , Hyötyläinen, T. & Oresic, M. (2021). Linking Gut Microbiome and Lipid Metabolism: Moving beyond Associations. Metabolites, 11 (1).
Sen, P. , Andrabi, S. B. A. , Buchacher, T. , Khan, M. M. , Kalim, U. U. , Lindeman, T. M. , Alves, M. A. , Hinkkanen, V. & et al. (2021). Quantitative genome-scale metabolic modeling of human CD4+ T cell differentiation reveals subset-specific regulation of glycosphingolipid pathways. Cell reports, 37 (6).
Sen, P. , Lamichhane, S. , Dickens, A. & Oresic, M. (2019). The Role of Omic Technologies in the Study of the Human Gut Microbiome. Reference Module in Food Science.

Artiklar, forskningsöversikter

Alves, M. A. , Lamichhane, S. , Dickens, A. , McGlinchey, A. J. , Ribeiro, H. C. , Sen, P. , Wei, F. , Hyötyläinen, T. & et al. (2021). Systems biology approaches to study lipidomes in health and disease. Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids, 1866 (2).